Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015800471.1_cds_XP_016469957.1_6199
CDS Infomation

[gene=LOC107792256] [db_xref=GeneID:107792256] [protein=probable LRR receptor-like serine/threonine-protein kinase At1g67720 isoform X3] [protein_id=XP_016469957.1] [location=join(131977..132431,132807..133318,133440..133572,133786..133857,133927..133995,134104..134175,134297..134365,134634..134806,134892..135145,135881..136007,136181..136246,136342..136528,136610..136742,137603..137920)] [gbkey=CDS]
Sequence

ATGGGAAATGGGAAACCAGTTGTGGTAGTGAATGCAGATGTAAACTCACAACAATATCAA
AGGCGCAGAGACTTTCCAGCAGACACCAAGAAATACTGTTATACTTTAAACACCAAGGAG
AGAAGGCGATATCTTGTCCGAGCAACATTTTTATATGGAAGTCCTGCAGCAGAGGGAACA
TACCCCAAATTTCAGCTCTACTTAGATGCAACAAAGTGGGCAACTATAACCATTTCAGAA
TCTTCAAGGATATATGTAAAGGAAATGATCATTAGAGCGCCTTCAAACTCGATCGATGTG
TGCTTGTGTTGTGCCACAACAGAGTCCCCTTTCATATCTACTCTTGAGCTGAGACCTCTA
AATTTGTCAATGTATGCCACAGACTATGAAGATAACTTTTACTTAAAAGTCGCAGCAAGA
GTAGATTTTGGAGCTCAAAGCAATGAACCTATAAGGTATCCGGATGATCCTTATGACCGT
ATATGGGATTCGGATCTAGAAAAAAGGCCAAATTTTCTGGTGGATGTGGCTGCAGGCACA
GAAAGAATCAACACAACAAAGTATATAAATACAAACACAAGAGAGTATCCACCTGTTAAA
GTAATGCAGACTGCAGTAGTTGGGACTAAAGGAATGCTCAGCTATAGGCTGAATCTTGAC
GATTTTCCAGCGAATGCACGAGCTTTTGCATATTTTGCTGAGATTGAAGACTTGGGGATA
AATGAGACCAGGAAATTTAAAATGGAGCATCCTTATGTCCCGGACTACAGCAATGCTGTG
GTGAATATAGCAGAGAATGCAAATGGAAGTTACACTTTATATGAGCCTAGCTACATGAAC
ATAACATTGGATTTTATACTGTCATTCTCCTTTGTGAAGACTCGTGACTCAACTCGAGGT
CCACTGCTAAGTGCAATGGAAATATGTAGATACGCGCAAATTGCTGCAAAGACCGATGAA
CAAGATGTGACCACTCTCAACGCTTTCCGCTCCATGTCGTTGGGAAGTGACTGGACAGAT
GAAGATGGTGATCCTTGCGTGGGTACTCAATGGGAATGGGTGACTTGCAGCACAACTATT
CCACCAAGAATCACAAAAATAACACTGTCGGGCAAGAATGTTAAGGGTGAAATTCCTCCC
GAGCTAAACCATATGGAAGGATTGACAGAGTTGTGGTTGGACGGAAACTCTCTGACCGGA
TCAATCCCTGACTTGAGCAATCTTGTTAATTTGAGAACTATACATCTTGAGGACAACAAG
TTGACTGGTCCAATACCTTCATACCTGGGAGGTTTACCAAGCTTAATAGAACTAGATGTC
CAGAATAACAGCCTAACTGGAGAAATACCTCCGTCATTATTAAAAGGAAAAGTAACTTTC
AAGTATGAAGGAAATCCTAATCTAAGACCCGAATCAAAGCATAATAAACGTCACAAAGTG
ATACTAGGAGTTTCAGTTGGAGCAGTTGTGCTTCTATTTGTTCTAATCACAGTCAGTATA
CTCTTTTTGTGCCACTTCAGAACAAAAGTATCTCATCAAAAAGGTGACACAAAAGGTGAG
TCTTTGCGTAGAAGCACAAAGGCCTCAACAACTTGTTCAATCGTGCGAGGTGGATCTTTA
ATGGATGAAGGTGTGGCGTACTATATCCCACTATCTGAGATAGAAGAAGCCACAGAAAAT
TTTTCTAAGAAAATTGGGAAGGGAAGTTTTGGACCTGTTTATTACGGAAGACTTAGAGAT
GGGAAGGAGGTTGCTGTTAAAACTATGGCAGATTCATCAAGCCATGGCACCAAACAGTTT
GCTACGGAGGTGGCTCTCTTGTCAAGGATTCATCACAGAAACTTGGTTCCTTTGATTGGA
TACTTTGAGGATGACCATCAACGCATGCTTGTCTATGAATACATGCATAATGGAACGTTG
AGAGATCACATAAGTGAGTCCACCAGTCAAAAGCATTTGGACTGGCTAGCACGTCTTCAT
ATCGCAGAAGATGCAGCCAAAGGACTTGAGTACTTACATACTGGATGCAACCCCTCTATC
ATTCATCGAGATGTGAAAACAAGCAACATTCTATTAGATATAAACATGCGAGCAAAAGTA
TCTGATTTTGGACTATCAAGGCAAGCTGAAGAAGATTTAACACATGTCTCAAGCGTGGCA
CGAGGAACTGTTGGCTACCTTGATCCTGAGTACTATGCAAATCAGCAATTGACAGAAAAA
AGTGATGTGTATAGCTTTGGGGTTGTCCTTTTGGAATTGATCTCTGGAAGAAGGCCTGTC
TCAACTGAGGAATATGGTGCTGAATGGAGCATTGTTCACTGGGCAAGATCATTGATTCGC
AAAGGAGACGTGATCAGTATCATGGATCGTGCACTAGTAGGACGCGTCAAAGTTGAGTCA
GTATGGAGAATAGCGGAAGTTGCAATACAATGTGTGGAAAGGCATGGCTCATCCAGGCCA
AGAATGCATGAAATCCTATCAGCCATACAGGATGCGATCAAGATCGAAAAGGGGATTGAC
AAATTGTCTTCATCAGGAAGTTCAAAGGCACAATCTTCAAGAAAGACACTATTAACAAGC
TTTCTTGACATAGAAAGCCCTGACATATCCAATAGCTCACTTACCCCTTCTGCTAGGTGA

Peptide Sequence

PEP ID

XP_016469957.1
PEP Infomation

PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g67720 isoform X3 [Nicotiana tabacum]
Sequence

MGNGKPVVVVNADVNSQQYQRRRDFPADTKKYCYTLNTKERRRYLVRATFLYGSPAAEGT
YPKFQLYLDATKWATITISESSRIYVKEMIIRAPSNSIDVCLCCATTESPFISTLELRPL
NLSMYATDYEDNFYLKVAARVDFGAQSNEPIRYPDDPYDRIWDSDLEKRPNFLVDVAAGT
ERINTTKYINTNTREYPPVKVMQTAVVGTKGMLSYRLNLDDFPANARAFAYFAEIEDLGI
NETRKFKMEHPYVPDYSNAVVNIAENANGSYTLYEPSYMNITLDFILSFSFVKTRDSTRG
PLLSAMEICRYAQIAAKTDEQDVTTLNAFRSMSLGSDWTDEDGDPCVGTQWEWVTCSTTI
PPRITKITLSGKNVKGEIPPELNHMEGLTELWLDGNSLTGSIPDLSNLVNLRTIHLEDNK
LTGPIPSYLGGLPSLIELDVQNNSLTGEIPPSLLKGKVTFKYEGNPNLRPESKHNKRHKV
ILGVSVGAVVLLFVLITVSILFLCHFRTKVSHQKGDTKGESLRRSTKASTTCSIVRGGSL
MDEGVAYYIPLSEIEEATENFSKKIGKGSFGPVYYGRLRDGKEVAVKTMADSSSHGTKQF
ATEVALLSRIHHRNLVPLIGYFEDDHQRMLVYEYMHNGTLRDHISESTSQKHLDWLARLH
IAEDAAKGLEYLHTGCNPSIIHRDVKTSNILLDINMRAKVSDFGLSRQAEEDLTHVSSVA
RGTVGYLDPEYYANQQLTEKSDVYSFGVVLLELISGRRPVSTEEYGAEWSIVHWARSLIR
KGDVISIMDRALVGRVKVESVWRIAEVAIQCVERHGSSRPRMHEILSAIQDAIKIEKGID
KLSSSGSSKAQSSRKTLLTSFLDIESPDISNSSLTPSAR

Transcript Sequence

Gene sequence data has not been registered.